Samples for Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022:

Download: [samples (this table)] [taxon abundances] [functional_abundance]
Sample Name/ID Sample type Amplicon target Location / site Latitude Longitude Collection timestamp
3G_2_Aug_23_22_Metagenome_2019 metagenome — Lake Erie 41.8338 -83.27890 2019-08-23T09:40:00-04:00
Zymo_Log_18S-ITS_dualindex_2019 amplicon 18S ITS — —
M.aeruginosa LE3_16S amplicon 16S V4 Lake Erie — —
NegCNTRL10_16S amplicon 16S V4 — — 2018-12-10
NegCNTRL9_16S amplicon 16S V4 — — 2018-12-07
NegCNTRL9_Metagenome metagenome — — — 2018-12-07
S. quadricauda CPCC 158_18S-ITS amplicon 18S ITS Lake Erie — —
SC02_22_16S amplicon 16S V4 — — 2018-09-03T13:36:52-04:00
SC02_22_18S-ITS amplicon 18S ITS — — 2018-09-03T13:36:52-04:00
SC02_50_16S amplicon 16S V4 — — 2018-09-03T13:36:52-04:00
SC02_50_18S-ITS amplicon 18S ITS — — 2018-09-03T13:36:52-04:00
SC02_50_Metagenome metagenome — — — 2018-09-03T13:36:52-04:00
SC03_22_16S amplicon 16S V4 Lake Erie 41.6674 -83.10710 2018-09-02T23:38:56-04:00
SC03_22_18S-ITS amplicon 18S ITS Lake Erie 41.6674 -83.10710 2018-09-02T23:38:56-04:00
SC03_22_Metagenome metagenome — Lake Erie 41.6674 -83.10710 2018-09-02T23:38:56-04:00
SC03_50_16S amplicon 16S V4 Lake Erie 41.6674 -83.10710 2018-09-02T23:38:56-04:00
Zymo_Log_16S_singleindex_2019 amplicon 16S V4 — —
SC03_50_18S-ITS amplicon 18S ITS Lake Erie 41.6674 -83.10710 2018-09-02T23:38:56-04:00
SC03_50_Metagenome metagenome — Lake Erie 41.6674 -83.10710 2018-09-02T23:38:56-04:00
SC04_22_16S amplicon 16S V4 Lake Erie 41.6674 -83.10710 2018-09-02T23:08:06-04:00
SC04_22_18S-ITS amplicon 18S ITS Lake Erie 41.6674 -83.10710 2018-09-02T23:08:06-04:00
SC04_22_Metagenome metagenome — Lake Erie 41.6674 -83.10710 2018-09-02T23:08:06-04:00
SC04_50_16S amplicon 16S V4 Lake Erie 41.6674 -83.10710 2018-09-02T23:08:06-04:00
SC04_50_18S-ITS amplicon 18S ITS Lake Erie 41.6674 -83.10710 2018-09-02T23:08:06-04:00
SC05_22_16S amplicon 16S V4 Lake Erie 41.7034 -83.07078 2018-09-02T18:52:02-04:00