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Found 5098 samples with:

Download: [samples (this table)] [taxon abundances] [functional_abundance]
Sample Name/ID Sample type Amplicon target Location / site Latitude Longitude Collection timestamp Dataset
093_FMRHC35 amplicon 16S Bv6 Milwaukee, Wisconsin 43.0310 -88.01490 2008-10-09 Water samples taken from Lake Michigan,[…] - Fisher et al. 205
09_SMN01E_5_6_09 amplicon 16S Bv6 Milwaukee, Wisconsin 43.0771 -88.04843 2009-05-06 Water samples taken from Lake Michigan,[…] - Fisher et al. 205
52_Junction_8_23_11 amplicon 16S Bv6 Milwaukee, Wisconsin 43.0247 -87.90270 2011-08-23 Water samples taken from Lake Michigan,[…] - Fisher et al. 205
162_MKE_River_10_14_11 amplicon 16S Bv6 Milwaukee, Wisconsin 43.0485 -87.91170 2011-10-14 Water samples taken from Lake Michigan,[…] - Fisher et al. 205
161_KK_River_10_14_11 amplicon 16S Bv6 Milwaukee, Wisconsin 43.0084 -87.90800 2011-10-14 Water samples taken from Lake Michigan,[…] - Fisher et al. 205
rr339p2 amplicon — Lake Mendota 43.0995 -89.4045 2013-08-06 Lake Mendota (WI) amplicon metagenomes - Rohwer et al. 2023
rr433p2 amplicon — Lake Mendota 43.0995 -89.4045 2009-11-14 Lake Mendota (WI) amplicon metagenomes - Rohwer et al. 2023
E2014-0102-100LTR metatranscriptome — Lake Erie / WE12 41.7033 -83.2583 2014-09-23 2014 Western Lake Erie Metagenomes and[…] - Yancey et al. 2022
N2710 amplicon 16S V3-V4 Niagra 43.0873 -79.2916 2014-11-17 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
LE-W13b metatranscriptome — Lake Erie / WE13 41.79 -83.15 August 2014 Metatranscriptomes from 2014 Lake Erie[…] - Steffen et al. 2017
N2719 amplicon 16S V3-V4 Niagra 43.1613 -79.9368 2014-11-17 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
N2718 amplicon 16S V3-V4 Niagra 43.1707 -79.9474 2014-11-17 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
3G_2_Aug_23_22_Metagenome_2019 metagenome — Lake Erie 41.8338 -83.27890 2019-08-23T09:40:00-04:00 Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
48-Urea-RepB metatranscriptome — Lake Erie 41.7491 -83.1074 2019-07-21 Metatranscriptomes from 2019 Lake Erie[…] - Pound et al. 2022
N2717 amplicon 16S V3-V4 Niagra 43.1033 -79.2112 2014-11-18 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
Zymo_Log_18S-ITS_dualindex_2019 amplicon 18S ITS — — Automated sampling of Western Lake Erie[…] - Den Uyl et al. 2022
E2014-0086-100LTR metatranscriptome — Lake Erie / WE4 41.8264 -83.1939 2014-09-08 2014 Western Lake Erie Metagenomes and[…] - Yancey et al. 2022
N2716 amplicon 16S V3-V4 Niagra 42.8763 -79.0199 2014-11-17 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
48h-Bicarbonate-RepA metatranscriptome — Lake Erie 41.7491 -83.1074 2019-07-21 Metatranscriptomes from 2019 Lake Erie[…] - Pound et al. 2022
N2724 amplicon 16S V3-V4 Niagra 42.9968 -79.5662 2014-11-17 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
48h-Bicarbonate RepC metatranscriptome — Lake Erie 41.7491 -83.1074 2019-07-21 Metatranscriptomes from 2019 Lake Erie[…] - Pound et al. 2022
N2715A amplicon 16S V3-V4 Niagra 42.8181 -79.0961 2014-07-29 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
LE WWC BNZ 36 metatranscriptome — Lake Erie 42.4305 -81.20620 2020-05-01 Western and Central Lake Erie[…] - Zepernick et al. 2022
SAMN03435841 metagenome — Lake Michigan 42.0791 -87.68300 2014-06-24 Lake Michigan near Chicago-area beaches - Sible et al. 2015
SAMN03436866 metagenome — Lake Michigan 41.7189 -87.52560 2014-07-08 Lake Michigan near Chicago-area beaches - Sible et al. 2015