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Found 5098 samples with:

Download: [samples (this table)] [taxon abundances] [functional_abundance]
Sample Name/ID Sample type Amplicon target Location / site Latitude Longitude Collection timestamp Dataset
rr872p4 amplicon — Lake Mendota 43.0995 -89.4045 2015-10-04 Lake Mendota (WI) amplicon metagenomes - Rohwer et al. 2023
HU38 amplicon 16S V3-V5 Lake Huron 44.7400 -82.06017 2008-08-06 Sediment samples from across the[…] - Winters et al. 2014
LE WWC BNZ 39 metatranscriptome — Lake Erie 42.4305 -81.20620 2020-05-01 Western and Central Lake Erie[…] - Zepernick et al. 2022
HU54 amplicon 16S V3-V5 Lake Huron 45.5167 -83.41717 2008-08-06 Sediment samples from across the[…] - Winters et al. 2014
ASHCO metatranscriptome — Lake Erie 41.6996 -83.2941 2014-08-28T16:00:00-04:00 Diel metatranscriptomes from 10-15m[…] - Davenport et al. 2019
HU951 amplicon 16S V3-V5 Lake Huron 44.3667 -82.83330 2008-08-06 Sediment samples from across the[…] - Winters et al. 2014
973_JulyB metatranscriptome — Lake Erie 41.79 -83.15 August 2013 Metatranscriptomes from 2014 Lake Erie[…] - Steffen et al. 2017
ER78M_MID_April2013 amplicon 16S V4-V5 Lake Erie 42.1167 -81.25000 2013-04-03 Transects across the Laurentian Great[…] - Paver et al. 2019
973_JulyA metatranscriptome — Lake Erie 41.79 -83.15 August 2013 Metatranscriptomes from 2014 Lake Erie[…] - Steffen et al. 2017
HU952 amplicon 16S V3-V5 Lake Huron 44.3667 -82.83330 2008-08-06 Sediment samples from across the[…] - Winters et al. 2014
HU953 amplicon 16S V3-V5 Lake Huron 44.3667 -82.83330 2008-08-06 Sediment samples from across the[…] - Winters et al. 2014
MI18 amplicon 16S V3-V5 Lake Michigan 42.7343 -86.99967 2008-08-02 Sediment samples from across the[…] - Winters et al. 2014
LE-W12-SurfaceA metatranscriptome — Lake Erie / WE12 41.79 -83.15 August 2013 Metatranscriptomes from 2014 Lake Erie[…] - Steffen et al. 2017
MI40 amplicon 16S V3-V5 Lake Michigan 44.7603 -86.96601 2008-08-03 Sediment samples from across the[…] - Winters et al. 2014
ON25 amplicon 16S V3-V5 Lake Ontario 43.5167 -79.08001 2008-08-12 Sediment samples from across the[…] - Winters et al. 2014
LE-W4b metatranscriptome — Lake Erie / WE4 41.79 -83.15 August 2014 Metatranscriptomes from 2014 Lake Erie[…] - Steffen et al. 2017
N2745 amplicon 16S V3-V4 Niagra 43.0462 -79.1230 2014-07-21 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
N2744 amplicon 16S V3-V4 Niagra 43.1268 -79.3959 2014-11-24 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
N2743 amplicon 16S V3-V4 Niagra 43.2532 -79.1259 2014-11-24 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
ON41 amplicon 16S V3-V5 Lake Ontario 43.7167 -78.02717 2008-08-12 Sediment samples from across the[…] - Winters et al. 2014
N2742 amplicon 16S V3-V4 Niagra 42.9309 -78.9375 2014-11-24 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
N2741 amplicon 16S V3-V4 Niagra 42.9180 -78.9714 2014-11-24 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
SU011 amplicon 16S V3-V5 Lake Superior 46.9927 -85.16050 2008-08-20 Sediment samples from across the[…] - Winters et al. 2014
N2740 amplicon 16S V3-V4 Niagra 43.1997 -79.5572 2014-11-18 Niagara Penninsula watershed extensive[…] - Mohiuddin et al. 2019
SU23 amplicon 16S V3-V5 Lake Superior 46.5975 -84.80690 2008-08-19 Sediment samples from across the[…] - Winters et al. 2014